// plasmaWordIndex.java // (C) 2005, 2006 by Michael Peter Christen; mc@anomic.de, Frankfurt a. M., Germany // first published 2005 on http://www.anomic.de // // This is a part of YaCy, a peer-to-peer based web search engine // // $LastChangedDate$ // $LastChangedRevision$ // $LastChangedBy$ // // LICENSE // // This program is free software; you can redistribute it and/or modify // it under the terms of the GNU General Public License as published by // the Free Software Foundation; either version 2 of the License, or // (at your option) any later version. // // This program is distributed in the hope that it will be useful, // but WITHOUT ANY WARRANTY; without even the implied warranty of // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the // GNU General Public License for more details. // // You should have received a copy of the GNU General Public License // along with this program; if not, write to the Free Software // Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA package de.anomic.plasma; import java.io.File; import java.util.ArrayList; import java.util.Date; import java.util.HashMap; import java.util.HashSet; import java.util.Iterator; import java.util.Map; import java.util.Set; import java.util.TreeSet; import de.anomic.htmlFilter.htmlFilterContentScraper; import de.anomic.index.indexCollectionRI; import de.anomic.index.indexContainer; import de.anomic.index.indexContainerOrder; import de.anomic.index.indexRAMRI; import de.anomic.index.indexRI; import de.anomic.index.indexRWIEntry; import de.anomic.index.indexURLEntry; import de.anomic.kelondro.kelondroBase64Order; import de.anomic.kelondro.kelondroCloneableIterator; import de.anomic.kelondro.kelondroMergeIterator; import de.anomic.kelondro.kelondroOrder; import de.anomic.kelondro.kelondroRotateIterator; import de.anomic.net.URL; import de.anomic.plasma.urlPattern.plasmaURLPattern; import de.anomic.server.logging.serverLog; import de.anomic.server.serverMemory; import de.anomic.yacy.yacyDHTAction; import de.anomic.yacy.yacySeedDB; public final class plasmaWordIndex implements indexRI { // environment constants public static final long wCacheMaxAge = 1000 * 60 * 30; // milliseconds; 30 minutes public static final int wCacheMaxChunk = 1000; // number of references for each urlhash public static final int lowcachedivisor = 200; public static final int maxCollectionPartition = 7; // should be 7 private final kelondroOrder indexOrder = kelondroBase64Order.enhancedCoder; private final indexRAMRI dhtOutCache, dhtInCache; private final indexCollectionRI collections; // new database structure to replace AssortmentCluster and FileCluster public boolean busyCacheFlush; // shows if a cache flush is currently performed private int flushsize; public final plasmaCrawlLURL loadedURL; public plasmaWordIndex(File indexPrimaryRoot, File indexSecondaryRoot, long preloadTime, serverLog log) { File textindexcache = new File(indexPrimaryRoot, "PUBLIC/TEXT/RICACHE"); if (!(textindexcache.exists())) textindexcache.mkdirs(); this.dhtOutCache = new indexRAMRI(textindexcache, indexRWIEntry.urlEntryRow, wCacheMaxChunk, wCacheMaxAge, "dump1.array", log); this.dhtInCache = new indexRAMRI(textindexcache, indexRWIEntry.urlEntryRow, wCacheMaxChunk, wCacheMaxAge, "dump2.array", log); // create collections storage path File textindexcollections = new File(indexPrimaryRoot, "PUBLIC/TEXT/RICOLLECTION"); if (!(textindexcollections.exists())) textindexcollections.mkdirs(); this.collections = new indexCollectionRI(textindexcollections, "collection", preloadTime, maxCollectionPartition, indexRWIEntry.urlEntryRow); // create LURL-db loadedURL = new plasmaCrawlLURL(indexSecondaryRoot, preloadTime); // performance settings busyCacheFlush = false; this.flushsize = 2000; } public int minMem() { return 1024*1024 /* indexing overhead */ + dhtOutCache.minMem() + dhtInCache.minMem() + collections.minMem(); } public int maxURLinDHTOutCache() { return dhtOutCache.maxURLinCache(); } public long minAgeOfDHTOutCache() { return dhtOutCache.minAgeOfCache(); } public long maxAgeOfDHTOutCache() { return dhtOutCache.maxAgeOfCache(); } public int maxURLinDHTInCache() { return dhtInCache.maxURLinCache(); } public long minAgeOfDHTInCache() { return dhtInCache.minAgeOfCache(); } public long maxAgeOfDHTInCache() { return dhtInCache.maxAgeOfCache(); } public int dhtOutCacheSize() { return dhtOutCache.size(); } public int dhtInCacheSize() { return dhtInCache.size(); } public void setMaxWordCount(int maxWords) { dhtOutCache.setMaxWordCount(maxWords); dhtInCache.setMaxWordCount(maxWords); } public void setWordFlushSize(int flushsize) { this.flushsize = flushsize; } public void dhtFlushControl(indexRAMRI theCache) { // check for forced flush synchronized (theCache) { if ((theCache.getMaxWordCount() > wCacheMaxChunk ) || (theCache.size() > theCache.getMaxWordCount()) || (serverMemory.available() < collections.minMem())) { flushCache(theCache, theCache.size() + flushsize - theCache.getMaxWordCount()); } } } public long getUpdateTime(String wordHash) { indexContainer entries = getContainer(wordHash, null, -1); if (entries == null) return 0; return entries.updated(); } public static indexContainer emptyContainer(String wordHash, int elementCount) { return new indexContainer(wordHash, indexRWIEntry.urlEntryRow, elementCount); } public void addEntry(String wordHash, indexRWIEntry entry, long updateTime, boolean dhtInCase) { // set dhtInCase depending on wordHash if ((!dhtInCase) && (yacyDHTAction.shallBeOwnWord(wordHash))) dhtInCase = true; // add the entry if (dhtInCase) { dhtInCache.addEntry(wordHash, entry, updateTime, true); dhtFlushControl(this.dhtInCache); } else { dhtOutCache.addEntry(wordHash, entry, updateTime, false); dhtFlushControl(this.dhtOutCache); } } public void addEntries(indexContainer entries, long updateTime, boolean dhtInCase) { assert (entries.row().objectsize() == indexRWIEntry.urlEntryRow.objectsize()); // set dhtInCase depending on wordHash if ((!dhtInCase) && (yacyDHTAction.shallBeOwnWord(entries.getWordHash()))) dhtInCase = true; // add the entry if (dhtInCase) { dhtInCache.addEntries(entries, updateTime, true); dhtFlushControl(this.dhtInCache); } else { dhtOutCache.addEntries(entries, updateTime, false); dhtFlushControl(this.dhtOutCache); } } public void flushCacheSome() { flushCache(dhtOutCache, (dhtOutCache.size() > 3 * flushsize) ? flushsize : Math.min(flushsize, Math.max(1, dhtOutCache.size() / lowcachedivisor))); flushCache(dhtInCache, (dhtInCache.size() > 3 * flushsize) ? flushsize : Math.min(flushsize, Math.max(1, dhtInCache.size() / lowcachedivisor))); } private void flushCache(indexRAMRI ram, int count) { if (ram.size() <= count) count = ram.size(); if (count <= 0) return; if (count > 5000) count = 5000; busyCacheFlush = true; String wordHash; ArrayList containerList = new ArrayList(); synchronized (ram) { boolean collectMax = true; indexContainer c; while (collectMax) { wordHash = ram.maxScoreWordHash(); c = ram.getContainer(wordHash, null, -1); if ((c != null) && (c.size() > wCacheMaxChunk)) { containerList.add(ram.deleteContainer(wordHash)); if (serverMemory.available() < collections.minMem()) break; // protect memory during flush } else { collectMax = false; } } count = count - containerList.size(); for (int i = 0; i < count; i++) { // possible position of outOfMemoryError ? if (ram.size() == 0) break; if (serverMemory.available() < collections.minMem()) break; // protect memory during flush // select one word to flush wordHash = ram.bestFlushWordHash(); // move one container from ram to flush list c = ram.deleteContainer(wordHash); if (c != null) containerList.add(c); } } // flush the containers collections.addMultipleEntries(containerList); //System.out.println("DEBUG-Finished flush of " + count + " entries from RAM to DB in " + (System.currentTimeMillis() - start) + " milliseconds"); busyCacheFlush = false; } private static final int hour = 3600000; private static final int day = 86400000; public static int microDateDays(Date modified) { return microDateDays(modified.getTime()); } public static int microDateDays(long modified) { // this calculates a virtual age from a given date // the purpose is to have an age in days of a given modified date // from a fixed standpoint in the past // one day has 60*60*24 seconds = 86400 seconds // we take mod 64**3 = 262144, this is the mask of the storage return (int) ((modified / day) % 262144); } public static String microDateHoursStr(long time) { return kelondroBase64Order.enhancedCoder.encodeLong(microDateHoursInt(time), 3); } public static int microDateHoursInt(long time) { return (int) ((time / hour) % 262144); } public static int microDateHoursAge(String mdhs) { return microDateHoursInt(System.currentTimeMillis()) - (int) kelondroBase64Order.enhancedCoder.decodeLong(mdhs); } public static long reverseMicroDateDays(int microDateDays) { return ((long) microDateDays) * ((long) day); } public int addPageIndex(URL url, String urlHash, Date urlModified, int size, plasmaParserDocument document, plasmaCondenser condenser, String language, char doctype, int outlinksSame, int outlinksOther) { // this is called by the switchboard to put in a new page into the index // use all the words in one condenser object to simultanous create index entries int wordCount = 0; int urlLength = url.toNormalform(true, true).length(); int urlComps = htmlFilterContentScraper.urlComps(url.toString()).length; // iterate over all words of context text Iterator i = condenser.words().entrySet().iterator(); Map.Entry wentry; String word; indexRWIEntry ientry; plasmaCondenser.wordStatProp wprop; while (i.hasNext()) { wentry = (Map.Entry) i.next(); word = (String) wentry.getKey(); wprop = (plasmaCondenser.wordStatProp) wentry.getValue(); assert (wprop.flags != null); ientry = new indexRWIEntry(urlHash, urlLength, urlComps, (document == null) ? urlLength : document.getTitle().length(), wprop.count, condenser.words().size(), condenser.sentences().size(), wprop.posInText, wprop.posInPhrase, wprop.numOfPhrase, 0, size, urlModified.getTime(), System.currentTimeMillis(), language, doctype, outlinksSame, outlinksOther, wprop.flags); addEntry(plasmaCondenser.word2hash(word), ientry, System.currentTimeMillis(), false); wordCount++; } return wordCount; } public boolean hasContainer(String wordHash) { if (dhtOutCache.hasContainer(wordHash)) return true; if (dhtInCache.hasContainer(wordHash)) return true; if (collections.hasContainer(wordHash)) return true; return false; } public indexContainer getContainer(String wordHash, Set urlselection, long maxTime) { if ((wordHash == null) || (wordHash.length() != yacySeedDB.commonHashLength)) { // wrong input return null; } // get from cache indexContainer container; synchronized (dhtOutCache) { container = dhtOutCache.getContainer(wordHash, urlselection, -1); } synchronized (dhtInCache) { if (container == null) { container = dhtInCache.getContainer(wordHash, urlselection, -1); } else { container.addAllUnique(dhtInCache.getContainer(wordHash, urlselection, -1)); } } // get from collection index synchronized (this) { if (container == null) { container = collections.getContainer(wordHash, urlselection, (maxTime < 0) ? -1 : maxTime); } else { container.addAllUnique(collections.getContainer(wordHash, urlselection, (maxTime < 0) ? -1 : maxTime)); } } return container; } public Map getContainers(Set wordHashes, Set urlselection, boolean deleteIfEmpty, boolean interruptIfEmpty, long maxTime) { // return map of wordhash:indexContainer // retrieve entities that belong to the hashes HashMap containers = new HashMap(); String singleHash; indexContainer singleContainer; Iterator i = wordHashes.iterator(); long start = System.currentTimeMillis(); long remaining; while (i.hasNext()) { // check time remaining = maxTime - (System.currentTimeMillis() - start); //if ((maxTime > 0) && (remaining <= 0)) break; if ((maxTime >= 0) && (remaining <= 0)) remaining = 100; // get next word hash: singleHash = (String) i.next(); // retrieve index singleContainer = getContainer(singleHash, urlselection, (maxTime < 0) ? -1 : remaining / (wordHashes.size() - containers.size())); // check result if (((singleContainer == null) || (singleContainer.size() == 0)) && (interruptIfEmpty)) return new HashMap(); containers.put(singleHash, singleContainer); } return containers; } public int size() { return java.lang.Math.max(collections.size(), java.lang.Math.max(dhtInCache.size(), dhtOutCache.size())); } public int indexSize(String wordHash) { int size = 0; size += dhtInCache.indexSize(wordHash); size += dhtOutCache.indexSize(wordHash); size += collections.indexSize(wordHash); return size; } public void close() { dhtInCache.close(); dhtOutCache.close(); synchronized (this) { collections.close(); loadedURL.close(); } } public indexContainer deleteContainer(String wordHash) { indexContainer c = new indexContainer( wordHash, indexRWIEntry.urlEntryRow, dhtInCache.sizeContainer(wordHash) + dhtOutCache.sizeContainer(wordHash) + collections.indexSize(wordHash) ); synchronized (dhtInCache) { c.addAllUnique(dhtInCache.deleteContainer(wordHash)); } synchronized (dhtOutCache) { c.addAllUnique(dhtOutCache.deleteContainer(wordHash)); } synchronized (this) { c.addAllUnique(collections.deleteContainer(wordHash)); } return c; } public boolean removeEntry(String wordHash, String urlHash) { boolean removed = false; synchronized (dhtInCache) { removed = removed | (dhtInCache.removeEntry(wordHash, urlHash)); } synchronized (dhtOutCache) { removed = removed | (dhtOutCache.removeEntry(wordHash, urlHash)); } synchronized (this) { removed = removed | (collections.removeEntry(wordHash, urlHash)); } return removed; } public int removeEntryMultiple(Set wordHashes, String urlHash) { // remove the same url hashes for multiple words // this is mainly used when correcting a index after a search Iterator i = wordHashes.iterator(); int count = 0; while (i.hasNext()) { if (removeEntry((String) i.next(), urlHash)) count++; } return count; } public int removeEntries(String wordHash, Set urlHashes) { int removed = 0; synchronized (dhtInCache) { removed += dhtInCache.removeEntries(wordHash, urlHashes); } synchronized (dhtOutCache) { removed += dhtOutCache.removeEntries(wordHash, urlHashes); } synchronized (this) { removed += collections.removeEntries(wordHash, urlHashes); } return removed; } public String removeEntriesExpl(String wordHash, Set urlHashes) { String removed = ""; synchronized (dhtInCache) { removed += dhtInCache.removeEntries(wordHash, urlHashes) + ", "; } synchronized (dhtOutCache) { removed += dhtOutCache.removeEntries(wordHash, urlHashes) + ", "; } synchronized (this) { removed += collections.removeEntries(wordHash, urlHashes); } return removed; } public void removeEntriesMultiple(Set wordHashes, Set urlHashes) { // remove the same url hashes for multiple words // this is mainly used when correcting a index after a search Iterator i = wordHashes.iterator(); while (i.hasNext()) { removeEntries((String) i.next(), urlHashes); } } public int removeWordReferences(Set words, String urlhash) { // sequentially delete all word references // returns number of deletions Iterator iter = words.iterator(); int count = 0; while (iter.hasNext()) { // delete the URL reference in this word index if (removeEntry(plasmaCondenser.word2hash((String) iter.next()), urlhash)) count++; } return count; } public int tryRemoveURLs(String urlHash) { // this tries to delete an index from the cache that has this // urlHash assigned. This can only work if the entry is really fresh // and can be found in the RAM cache // this returns the number of deletion that had been possible int d = 0; d = dhtInCache.tryRemoveURLs(urlHash); if (d > 0) return d; else return dhtOutCache.tryRemoveURLs(urlHash); } public synchronized TreeSet indexContainerSet(String startHash, boolean ram, boolean rot, int count) { // creates a set of indexContainers // this does not use the dhtInCache kelondroOrder containerOrder = new indexContainerOrder((kelondroOrder) indexOrder.clone()); containerOrder.rotate(startHash.getBytes()); TreeSet containers = new TreeSet(containerOrder); Iterator i = wordContainers(startHash, ram, rot); if (ram) count = Math.min(dhtOutCache.size(), count); indexContainer container; // this loop does not terminate using the i.hasNex() predicate when rot == true // because then the underlying iterator is a rotating iterator without termination // in this case a termination must be ensured with a counter // It must also be ensured that the counter is in/decreased every loop while ((count > 0) && (i.hasNext())) { container = (indexContainer) i.next(); if ((container != null) && (container.size() > 0)) { containers.add(container); } count--; // decrease counter even if the container was null or empty to ensure termination } return containers; // this may return less containers as demanded } public synchronized kelondroCloneableIterator wordContainers(String startHash, boolean ram, boolean rot) { kelondroCloneableIterator i = wordContainers(startHash, ram); if (rot) { return new kelondroRotateIterator(i, new String(kelondroBase64Order.zero(startHash.length()))); } else { return i; } } public synchronized kelondroCloneableIterator wordContainers(String startWordHash, boolean ram) { kelondroOrder containerOrder = new indexContainerOrder((kelondroOrder) indexOrder.clone()); containerOrder.rotate(startWordHash.getBytes()); if (ram) { return dhtOutCache.wordContainers(startWordHash, false); } else { return new kelondroMergeIterator( dhtOutCache.wordContainers(startWordHash, false), collections.wordContainers(startWordHash, false), containerOrder, indexContainer.containerMergeMethod, true); } } // The Cleaner class was provided as "UrldbCleaner" by Hydrox public synchronized Cleaner makeCleaner(plasmaCrawlLURL lurl, String startHash) { return new Cleaner(lurl, startHash); } public class Cleaner extends Thread { private String startHash; private boolean run = true; private boolean pause = false; public int rwiCountAtStart = 0; public String wordHashNow = ""; public String lastWordHash = ""; public int lastDeletionCounter = 0; private plasmaCrawlLURL lurl; public Cleaner(plasmaCrawlLURL lurl, String startHash) { this.lurl = lurl; this.startHash = startHash; this.rwiCountAtStart = size(); } public void run() { serverLog.logInfo("INDEXCLEANER", "IndexCleaner-Thread started"); indexContainer container = null; indexRWIEntry entry = null; URL url = null; HashSet urlHashs = new HashSet(); Iterator indexContainerIterator = indexContainerSet(startHash, false, false, 100).iterator(); while (indexContainerIterator.hasNext() && run) { waiter(); container = (indexContainer) indexContainerIterator.next(); Iterator containerIterator = container.entries(); wordHashNow = container.getWordHash(); while (containerIterator.hasNext() && run) { waiter(); entry = (indexRWIEntry) containerIterator.next(); // System.out.println("Wordhash: "+wordHash+" UrlHash: // "+entry.getUrlHash()); indexURLEntry ue = lurl.load(entry.urlHash(), null); if (ue == null) { urlHashs.add(entry.urlHash()); } else { url = ue.comp().url(); if ((url == null) || (plasmaSwitchboard.urlBlacklist.isListed(plasmaURLPattern.BLACKLIST_CRAWLER, url) == true)) { urlHashs.add(entry.urlHash()); } } } if (urlHashs.size() > 0) { int removed = removeEntries(container.getWordHash(), urlHashs); serverLog.logFine("INDEXCLEANER", container.getWordHash() + ": " + removed + " of " + container.size() + " URL-entries deleted"); lastWordHash = container.getWordHash(); lastDeletionCounter = urlHashs.size(); urlHashs.clear(); } if (!containerIterator.hasNext()) { // We may not be finished yet, try to get the next chunk of wordHashes TreeSet containers = indexContainerSet(container.getWordHash(), false, false, 100); indexContainerIterator = containers.iterator(); // Make sure we don't get the same wordhash twice, but don't skip a word if ((indexContainerIterator.hasNext()) && (!container.getWordHash().equals(((indexContainer) indexContainerIterator.next()).getWordHash()))) { indexContainerIterator = containers.iterator(); } } } serverLog.logInfo("INDEXCLEANER", "IndexCleaner-Thread stopped"); } public void abort() { synchronized(this) { run = false; this.notifyAll(); } } public void pause() { synchronized (this) { if (!pause) { pause = true; serverLog.logInfo("INDEXCLEANER", "IndexCleaner-Thread paused"); } } } public void endPause() { synchronized (this) { if (pause) { pause = false; this.notifyAll(); serverLog.logInfo("INDEXCLEANER", "IndexCleaner-Thread resumed"); } } } public void waiter() { synchronized (this) { if (this.pause) { try { this.wait(); } catch (InterruptedException e) { this.run = false; return; } } } } } }