// plasmaWordIndexCache.java // ------------------------- // part of YACY // (C) by Michael Peter Christen; mc@anomic.de // first published on http://www.anomic.de // Frankfurt, Germany, 2005 // last major change: 6.5.2005 // // This program is free software; you can redistribute it and/or modify // it under the terms of the GNU General Public License as published by // the Free Software Foundation; either version 2 of the License, or // (at your option) any later version. // // This program is distributed in the hope that it will be useful, // but WITHOUT ANY WARRANTY; without even the implied warranty of // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the // GNU General Public License for more details. // // You should have received a copy of the GNU General Public License // along with this program; if not, write to the Free Software // Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA // // Using this software in any meaning (reading, learning, copying, compiling, // running) means that you agree that the Author(s) is (are) not responsible // for cost, loss of data or any harm that may be caused directly or indirectly // by usage of this softare or this documentation. The usage of this software // is on your own risk. The installation and usage (starting/running) of this // software may allow other people or application to access your computer and // any attached devices and is highly dependent on the configuration of the // software which must be done by the user of the software; the author(s) is // (are) also not responsible for proper configuration and usage of the // software, even if provoked by documentation provided together with // the software. // // Any changes to this file according to the GPL as documented in the file // gpl.txt aside this file in the shipment you received can be done to the // lines that follows this copyright notice here, but changes must not be // done inside the copyright notive above. A re-distribution must contain // the intact and unchanged copyright notice. // Contributions and changes to the program code must be marked as such. package de.anomic.plasma; import java.io.*; import java.util.*; import java.lang.RuntimeException; import de.anomic.kelondro.*; import de.anomic.server.serverLog; import de.anomic.yacy.yacySeedDB; public class plasmaWordIndexCache implements plasmaWordIndexInterface { // environment constants private static final String indexDumpFileName = "indexDump0.stack"; private static final String singletonFileName = "indexSingletons0.db"; private static final int[] bufferStructure = new int[]{ plasmaWordIndexEntry.wordHashLength, // a wordHash 4, // occurrence counter 8, // timestamp of last access plasmaWordIndexEntry.urlHashLength, // corresponding URL hash plasmaWordIndexEntry.attrSpaceLong // URL attributes }; // class variables private File databaseRoot; private plasmaWordIndexInterface backend; private TreeMap cache; private kelondroMScoreCluster hashScore; private HashMap hashDate; private int maxWords; private serverLog log; private kelondroTree singletons; private long singletonBufferSize; // calculated constants private static String minKey, maxKey; static { maxKey = ""; for (int i = 0; i < yacySeedDB.commonHashLength; i++) maxKey += 'z'; minKey = ""; for (int i = 0; i < yacySeedDB.commonHashLength; i++) maxKey += '-'; } public plasmaWordIndexCache(File databaseRoot, plasmaWordIndexInterface backend, int singletonbufferkb, serverLog log) { // creates a new index cache // the cache has a back-end where indexes that do not fit in the cache are flushed this.databaseRoot = databaseRoot; this.singletonBufferSize = singletonbufferkb * 1024; this.cache = new TreeMap(); this.hashScore = new kelondroMScoreCluster(); this.hashDate = new HashMap(); this.maxWords = 10000; this.backend = backend; this.log = log; File singletonFile = new File(databaseRoot, singletonFileName); if (singletonFile.exists()) { // open existing singeton tree file try { singletons = new kelondroTree(singletonFile, singletonBufferSize); log.logSystem("Opened Singleton Database, " + singletons.size() + " entries."); } catch (IOException e){ log.logError("unable to open singleton database: " + e.getMessage()); e.printStackTrace(); } } else { // create new sigleton tree file try { singletons = new kelondroTree(singletonFile, singletonBufferSize, bufferStructure); log.logSystem("Created new Singleton Database"); } catch (IOException e){ log.logError("unable to create singleton database: " + e.getMessage()); e.printStackTrace(); } } // read in dump of last session try { restore(); } catch (IOException e){ log.logError("unable to restore cache dump: " + e.getMessage()); e.printStackTrace(); } } private void dump(int waitingSeconds) throws IOException { log.logSystem("creating dump for index cache, " + cache.size() + " words (and much more urls)"); File indexDumpFile = new File(databaseRoot, indexDumpFileName); if (indexDumpFile.exists()) indexDumpFile.delete(); kelondroStack dumpStack = new kelondroStack(indexDumpFile, 0, bufferStructure); long startTime = System.currentTimeMillis(); long messageTime = System.currentTimeMillis() + 5000; long wordsPerSecond = 0, wordcount = 0, urlcount = 0; synchronized (cache) { Iterator i = cache.entrySet().iterator(); //Iterator i = hashScore.scores(true); Map.Entry entry; String wordHash; plasmaWordIndexEntryContainer container; long creationTime; plasmaWordIndexEntry wordEntry; byte[][] row = new byte[5][]; while (i.hasNext()) { // get entries entry = (Map.Entry) i.next(); //wordHash = (String) i.next(); wordHash = (String) entry.getKey(); creationTime = getCreationTime(wordHash); //container = (plasmaWordIndexEntryContainer) cache.get(wordHash); container = (plasmaWordIndexEntryContainer) entry.getValue(); // put entries on stack if (container != null) { Iterator ci = container.entries(); while (ci.hasNext()) { wordEntry = (plasmaWordIndexEntry) ci.next(); row[0] = wordHash.getBytes(); row[1] = kelondroRecords.long2bytes(container.size(), 4); row[2] = kelondroRecords.long2bytes(creationTime, 8); row[3] = wordEntry.getUrlHash().getBytes(); row[4] = wordEntry.toEncodedForm(true).getBytes(); dumpStack.push(row); urlcount++; } } wordcount++; // write a log if (System.currentTimeMillis() > messageTime) { wordsPerSecond = wordcount * 1000 / (1 + System.currentTimeMillis() - startTime); log.logInfo("dumping status: " + wordcount + " words done, " + ((cache.size() - wordcount) / wordsPerSecond) + " seconds remaining"); messageTime = System.currentTimeMillis() + 5000; } } } dumpStack.close(); log.logSystem("dumped " + urlcount + " word/url relations in " + ((System.currentTimeMillis() - startTime) / 1000) + " seconds"); } private long restore() throws IOException { File indexDumpFile = new File(databaseRoot, indexDumpFileName); if (!(indexDumpFile.exists())) return 0; kelondroStack dumpStack = new kelondroStack(indexDumpFile, 0); log.logSystem("restore dump of index cache, " + dumpStack.size() + " word/url relations"); long startTime = System.currentTimeMillis(); long messageTime = System.currentTimeMillis() + 5000; long urlCount = 0, urlsPerSecond = 0; synchronized (cache) { Iterator i = dumpStack.iterator(); kelondroRecords.Node node; String wordHash; plasmaWordIndexEntryContainer container; long creationTime; plasmaWordIndexEntry wordEntry; byte[][] row; while (i.hasNext()) { // get out one entry node = (kelondroRecords.Node) i.next(); row = node.getValues(); wordHash = new String(row[0]); creationTime = kelondroRecords.bytes2long(row[2]); wordEntry = new plasmaWordIndexEntry(new String(row[3]), new String(row[4])); // store to cache addEntry(wordHash, wordEntry, creationTime); urlCount++; // write a log if (System.currentTimeMillis() > messageTime) { urlsPerSecond = 1 + urlCount * 1000 / (1 + System.currentTimeMillis() - startTime); log.logInfo("restoring status: " + urlCount + " urls done, " + ((dumpStack.size() - urlCount) / urlsPerSecond) + " seconds remaining"); messageTime = System.currentTimeMillis() + 5000; } } } dumpStack.close(); log.logSystem("restored " + cache.size() + " words in " + ((System.currentTimeMillis() - startTime) / 1000) + " seconds"); return urlCount; } // singleton access methods private void storeSingleton(String wordHash, plasmaWordIndexEntry entry, long creationTime) { // stores a word index to singleton database // this throws an exception if the word hash already existed //log.logDebug("storeSingleton: wordHash=" + wordHash + ", urlHash=" + entry.getUrlHash() + ", time=" + creationTime); byte[][] row = new byte[5][]; row[0] = wordHash.getBytes(); row[1] = kelondroRecords.long2bytes(1, 4); row[2] = kelondroRecords.long2bytes(creationTime, 8); row[3] = entry.getUrlHash().getBytes(); row[4] = entry.toEncodedForm(true).getBytes(); byte[][] oldrow = null; try { oldrow = singletons.put(row); } catch (IOException e) { log.logFailure("storeSingleton/IO-error: " + e.getMessage() + " - reset singleton-DB"); e.printStackTrace(); resetSingletonDatabase(); } catch (kelondroException e) { log.logFailure("storeSingleton/kelondro-error: " + e.getMessage() + " - reset singleton-DB"); e.printStackTrace(); resetSingletonDatabase(); } if (oldrow != null) throw new RuntimeException("Store to singleton ambiguous"); } public Object[] /*{plasmaWordIndexEntry, Long(creationTime)}*/ readSingleton(String wordHash) { // returns a single word index from singleton database; returns null if index does not exist //log.logDebug("readSingleton: wordHash=" + wordHash); byte[][] row = null; try { row = singletons.get(wordHash.getBytes()); } catch (IOException e) { log.logFailure("readSingleton/IO-error: " + e.getMessage() + " - reset singleton-DB"); e.printStackTrace(); resetSingletonDatabase(); } catch (kelondroException e) { log.logFailure("readSingleton/kelondro-error: " + e.getMessage() + " - reset singleton-DB"); e.printStackTrace(); resetSingletonDatabase(); } if (row == null) return null; long creationTime = kelondroRecords.bytes2long(row[2]); plasmaWordIndexEntry wordEntry = new plasmaWordIndexEntry(new String(row[3]), new String(row[4])); return new Object[]{wordEntry, new Long(creationTime)}; } private void removeSingleton(String wordHash) { // deletes a word index from singleton database //log.logDebug("removeSingleton: wordHash=" + wordHash); byte[][] row = null; try { row = singletons.remove(wordHash.getBytes()); } catch (IOException e) { log.logFailure("removeSingleton/IO-error: " + e.getMessage() + " - reset singleton-DB"); e.printStackTrace(); resetSingletonDatabase(); } catch (kelondroException e) { log.logFailure("removeSingleton/kelondro-error: " + e.getMessage() + " - reset singleton-DB"); e.printStackTrace(); resetSingletonDatabase(); } } private void resetSingletonDatabase() { // deletes the singleton database and creates a new one try { singletons.close(); } catch (IOException e) {} File singletonFile = new File(databaseRoot, singletonFileName); if (!(singletonFile.delete())) throw new RuntimeException("cannot delete singleton database"); try { singletons = new kelondroTree(singletonFile, singletonBufferSize, bufferStructure); } catch (IOException e){ log.logError("unable to re-create singleton database: " + e.getMessage()); e.printStackTrace(); } } public Iterator singletonHashes(String startWordHash, boolean up, boolean rot) { try { return singletons.keys(up, rot, startWordHash.getBytes()); } catch (IOException e) { log.logFailure("iterateSingleton/IO-error: " + e.getMessage() + " - reset singleton-DB"); e.printStackTrace(); resetSingletonDatabase(); return null; } } // cache settings public int maxURLinWordCache() { return hashScore.getScore(hashScore.getMaxObject()); } public int wordCacheRAMSize() { return cache.size(); } public int singletonsSize() { return singletons.size(); } public void setMaxWords(int maxWords) { this.maxWords = maxWords; } public int size() { return java.lang.Math.max(singletons.size(), java.lang.Math.max(backend.size(), cache.size())); } public Iterator wordHashes(String startWordHash, boolean up) { // here we merge 3 databases into one view: // - the RAM Cache // - the singleton File Cache // - the backend if (!(up)) throw new RuntimeException("plasmaWordIndexCache.wordHashes can only count up"); return new kelondroMergeIterator( new kelondroMergeIterator( cache.keySet().iterator(), singletonHashes(startWordHash, true, false), true), backend.wordHashes(startWordHash, true), true); } private int flushFromMem(String key, boolean reintegrate) { // this method flushes indexes out from the ram to the disc. // at first we check the singleton database and act accordingly // if we we are to flush an index, but see also an entry in the singletons, we // decide upn the 'reintegrate'-Flag: // true: do not flush to disc, but re-Integrate the singleton to the RAM // false: flush the singleton together with container to disc plasmaWordIndexEntryContainer container = null; long time; synchronized (cache) { // get the container container = (plasmaWordIndexEntryContainer) cache.get(key); if (container == null) return 0; // flushing of nonexisting key time = getCreationTime(key); // remove it from the cache cache.remove(key); hashScore.deleteScore(key); hashDate.remove(key); } // now decide where to flush that container Object[] singleton = readSingleton(key); if (singleton == null) { // not found in singletons if (container.size() == 1) { // it is a singleton: store to singleton storeSingleton(key, container.getOne(), time); return 1; } else { // store to back-end; this should be a rare case return backend.addEntries(container, time); } } else { // we have a singleton and need to integrate this in the flush plasmaWordIndexEntry oldEntry = (plasmaWordIndexEntry) singleton[0]; long oldTime = ((Long) singleton[1]).longValue(); if (container.contains(oldEntry.getUrlHash())) { // we have an double-occurrence if (container.size() == 1) { // it is superfluous to flush this, simple do nothing return 0; } else { // we flush to the backend, and the entry from the singletons removeSingleton(key); return backend.addEntries(container, java.lang.Math.max(time, oldTime)); } } else { // now we have more than one entry // we must remove the key from the singleton database removeSingleton(key); // .. and put it to the container container.add(oldEntry); if (reintegrate) { // put singleton together with container back to ram synchronized (cache) { cache.put(key, container); hashScore.setScore(key, container.size()); hashDate.put(key, new Long(time)); } return -1; } else { // add this to the backend return backend.addEntries(container, java.lang.Math.max(time, oldTime)); } } } } private boolean flushFromSingleton(String key) { Object[] singleton = readSingleton(key); if (singleton == null) { return false; } else { // we have a singleton plasmaWordIndexEntry entry = (plasmaWordIndexEntry) singleton[0]; long time = ((Long) singleton[1]).longValue(); // remove it from the singleton database removeSingleton(key); // integrate it to the backend return backend.addEntries(plasmaWordIndexEntryContainer.instantContainer(key, entry), time) > 0; } } private int flushFromMemToLimit() { if ((hashScore.size() == 0) && (cache.size() == 0)) { serverLog.logDebug("PLASMA INDEXING", "flushToLimit: called but cache is empty"); return 0; } if ((hashScore.size() == 0) && (cache.size() != 0)) { serverLog.logError("PLASMA INDEXING", "flushToLimit: hashScore.size=0 but cache.size=" + cache.size()); return 0; } if ((hashScore.size() != 0) && (cache.size() == 0)) { serverLog.logError("PLASMA INDEXING", "flushToLimit: hashScore.size=" + hashScore.size() + " but cache.size=0"); return 0; } //serverLog.logDebug("PLASMA INDEXING", "flushSpecific: hashScore.size=" + hashScore.size() + ", cache.size=" + cache.size()); int total = 0; synchronized (hashScore) { String key; int count; Long createTime; // flush high-scores while ((total < 100) && (hashScore.size() >= maxWords)) { key = (String) hashScore.getMaxObject(); createTime = (Long) hashDate.get(key); count = hashScore.getScore(key); if (count < 5) { log.logWarning("flushing of high-key " + key + " not appropriate (too less entries, count=" + count + "): increase cache size"); break; } if ((createTime != null) && ((System.currentTimeMillis() - createTime.longValue()) < 9000)) { //log.logDebug("high-key " + key + " is too fresh, interrupting flush (count=" + count + ", cachesize=" + cache.size() + ", singleton-size=" + singletons.size() + ")"); break; } //log.logDebug("flushing high-key " + key + ", count=" + count + ", cachesize=" + cache.size() + ", singleton-size=" + singletons.size()); total += flushFromMem(key, false); } // flush singletons Iterator i = hashScore.scores(true); ArrayList al = new ArrayList(); while ((i.hasNext()) && (total < 200)) { key = (String) i.next(); createTime = (Long) hashDate.get(key); count = hashScore.getScore(key); if (count > 1) { //log.logDebug("flush of singleton-key " + key + ": count too high (count=" + count + ")"); break; } if ((createTime != null) && ((System.currentTimeMillis() - createTime.longValue()) < 90000)) { //log.logDebug("singleton-key " + key + " is too fresh, interrupting flush (count=" + count + ", cachesize=" + cache.size() + ", singleton-size=" + singletons.size() + ")"); continue; } //log.logDebug("flushing singleton-key " + key + ", count=" + count + ", cachesize=" + cache.size() + ", singleton-size=" + singletons.size()); al.add(key); total++; } for (int k = 0; k < al.size(); k++) flushFromMem((String) al.get(k), true); } return total; } public plasmaWordIndexEntity getIndex(String wordHash, boolean deleteIfEmpty) { flushFromMem(wordHash, false); flushFromSingleton(wordHash); return backend.getIndex(wordHash, deleteIfEmpty); } public long getCreationTime(String wordHash) { Long time = (Long) hashDate.get(wordHash); if (time == null) return 0; return time.longValue(); } public void deleteIndex(String wordHash) { synchronized (cache) { cache.remove(wordHash); hashScore.deleteScore(wordHash); hashDate.remove(wordHash); } removeSingleton(wordHash); backend.deleteIndex(wordHash); } public synchronized int removeEntries(String wordHash, String[] urlHashes, boolean deleteComplete) { flushFromMem(wordHash, false); flushFromSingleton(wordHash); return backend.removeEntries(wordHash, urlHashes, deleteComplete); } public synchronized int addEntries(plasmaWordIndexEntryContainer container, long creationTime) { //serverLog.logDebug("PLASMA INDEXING", "addEntryToIndexMem: cache.size=" + cache.size() + "; hashScore.size=" + hashScore.size()); flushFromMemToLimit(); //if (flushc > 0) serverLog.logDebug("PLASMA INDEXING", "addEntryToIndexMem - flushed " + flushc + " entries"); // put new words into cache int added = 0; synchronized (cache) { String wordHash = container.wordHash(); plasmaWordIndexEntryContainer entries = (plasmaWordIndexEntryContainer) cache.get(wordHash); // null pointer exception? wordhash != null! must be cache==null if (entries == null) entries = new plasmaWordIndexEntryContainer(wordHash); added = entries.add(container); if (added > 0) { cache.put(wordHash, entries); hashScore.addScore(wordHash, added); hashDate.put(wordHash, new Long(creationTime)); } } //System.out.println("DEBUG: cache = " + cache.toString()); return added; } private void addEntry(String wordHash, plasmaWordIndexEntry newEntry, long creationTime) { plasmaWordIndexEntryContainer entries = (plasmaWordIndexEntryContainer) cache.get(wordHash); if (entries == null) entries = new plasmaWordIndexEntryContainer(wordHash); if (entries.add(newEntry)) { cache.put(wordHash, entries); hashScore.incScore(wordHash); hashDate.put(wordHash, new Long(creationTime)); } } public void close(int waitingSeconds) { try { singletons.close(); } catch (IOException e){ log.logError("unable to close singleton database: " + e.getMessage()); e.printStackTrace(); } try { dump(waitingSeconds); } catch (IOException e){ log.logError("unable to dump cache: " + e.getMessage()); e.printStackTrace(); } } }